[CentOS] trouble installing Math::BigInt module

Tue Apr 1 23:10:44 UTC 2014
Tom Robinson <tom.robinson at motec.com.au>

Tom Robinson
IT Manager/System Administrator

MoTeC Pty Ltd

121 Merrindale Drive
Croydon South
3136 Victoria
Australia

T: +61 3 9761 5050
F: +61 3 9761 5051   
E: tom.robinson at motec.com.au

On 01/04/14 19:04, Bennett Haselton wrote:
> On 3/31/2014 10:42 PM, Tom Robinson wrote:
>> On 01/04/14 16:19, Bennett Haselton wrote:
>>> On 3/31/2014 7:56 PM, Tom Robinson wrote:
>>>> Can you verify to which packages thefiles belong?
>>>>
>>>> Try using RPM:
>>>>
>>>> rpm -qf /usr/lib/perl5/vendor_perl/5.8.8/Net/IP.pm
>>> On the old machine:
>>> perl-Net-IP-1.25-2.fc6
>>>> and
>>>>
>>>> rpm -qf /usr/lib/perl5/vendor_perl/5.8.8/Crypt/DSA/KeyChain.pm
>>> On the new machine:
>>> perl-Crypt-DSA-1.16-1.el5.rf
>> That should be a good starting point. Your check on installed packages as preposed by John shows two
>> very different packaged environments. Did you ever use CPAN on the old or new machine?
> Yes, on both.  I needed it because I needed to install Crypt::Twofish 
> and it didn't seem to be available from the default repositories used by 
> yum but it was available from CPAN.
So I stand alone on this, but CPAN can work. I use it.
> Because there were dozens of sources that I read, plus probably 
> thousands of others that I didn't read, saying that installing from CPAN 
> was a way to install Perl modules, I figured it was reasonably safe to 
> follow those directions, so I went ahead and did it.
Part of the issue is, as others have stated, you have a mish/mash of so many different sources that
they don't play together nicely any more. Best if you pare back to the basics.

Try just core and EPEL packages to start with. If you can't find a package for your needs you have a
few options. Compile a package yourself or use CPAN.

CPAN on CentOS 5 is more difficult because when package updates arrive they can clobber you nicely
installed CPAN libraries. CentOS 6 handles this better. CPAN does allow you to configure the install
path for libraries, however, so you can defeat the package update clobberring issue.

In your case, probably best to stick with the package approach and compile a new package based on
the installed core and EPEL packages to resolve the rest of your requirements.

>
> Now, later I found out that you can get your machine into an 
> inconsistent state by installing things from both CPAN and yum 
> repositories, and moreover apparently you can't even properly uninstall 
> things that are installed by CPAN:
> http://stackoverflow.com/questions/2626449/how-can-i-de-install-a-perl-module-installed-via-cpan
> so by following directions to the letter which are repeated in thousands 
> of sources, I apparently put my machine in a state that will cause 
> frequent unpredictable conflicts with all the things installed by the 
> system package manager, and the damage is irreversible.
>
> Is that about right? :)
>
> At about the same time I learned not to use CPAN, the person helping me 
> solve the current problem said that I could make the run-time errors go 
> away by going into CPAN and install Math::BigInt -- which led to a new 
> error, getting "Math::BigInt: couldn't load specified math lib(s), 
> fallback to Math::BigInt::Calc at 
> /usr/lib/perl5/vendor_perl/5.8.8/Crypt/DH.pm line 6", so then I 
> installed Math::BigInt::Pari through CPAN and it fixed the problem. I 
> had to use CPAN because it was the only solution he knew and it was an 
> emergency to get that error fixed.
>
> So, going forward, to mitigate the damage, should I just take all the 
> packages that are currently only listed as installed on the old machine, 
> truncate the version number (so e.g. truncate 
> "perl-Compress-Raw-Zlib-2.052-1.el5.rf" to just 
> "perl-Compress-Raw-Zlib2") and install that with yum on the command 
> line?  (Thanks for that list, by the way.)
>
> And more generally, what is the best practice if I want to install a 
> module like Crypt::Twofish that was not in the default yum repositories, 
> if John and C.L. are saying to avoid CPAN, and both John and Tom are 
> saying to avoid adding extra yum repositories?  I'd like to use yum just 
> for consistency since it automatically handles dependencies and such, 
> and at least if I always use yum, then yum will always be "aware" of 
> what's installed already (as opposed to things installed from CPAN).
>
> Bennett
>
>> I would work
>> to bring the new machine's perl environment as close to that of the old machine's.
>>
>> Indeed, perl-Net-SFTP package is only installed on the new machine!
>>
>> Your package output is reformatted here. Work through this to bring your environments as close as
>> possible and check if you have used CPAN to install packages in the past.
>>
>> $ diff -yW80 /tmp/oldlist /tmp/newlist
>> perl-5.8.8-41.el5                       perl-5.8.8-41.el5
>> perl-Compress-Raw-Bzip2-2.052-1.el5.r | perl-Class-Loader-2.03-1.2.el5.rf
>> perl-Compress-Raw-Zlib-2.052-1.el5.rf | perl-Compress-Zlib-1.42-1.fc6
>> perl-Convert-ASN1-0.22-1.el5.rf       | perl-Convert-ASCII-Armour-1.4-1.2.el5
>> perl-Crypt-SSLeay-0.57-3.el5.rf       | perl-Convert-ASN1-0.20-1.1
>> perl-DBD-mysql-4.014-1.el5.rf         | perl-Convert-PEM-0.07-1.2.el5.rf
>> perl-DBI-1.615-1.el5.rf               | perl-Crypt-CBC-2.30-1.el5.rf
>>                                        > perl-Crypt-DES-2.05-3.2.el5.rf
>>                                        > perl-Crypt-DH-0.06-1.2.el5.rf
>>                                        > perl-Crypt-DSA-1.16-1.el5.rf
>>                                        > perl-Crypt-IDEA-1.08-1.el5.rf
>>                                        > perl-Crypt-Primes-0.50-1.2.el5.rf
>>                                        > perl-Crypt-RSA-1.99-1.el5.rf
>>                                        > perl-Crypt-Random-1.25-1.2.el5.rf
>>                                        > perl-Crypt-Twofish-2.13-1.el5.rf
>>                                        > perl-DBD-MySQL-3.0007-2.el5
>>                                        > perl-DBI-1.52-2.el5
>>                                        > perl-Data-Buffer-0.04-1.2.el5.rf
>> perl-Digest-HMAC-1.01-15                perl-Digest-HMAC-1.01-15
>>                                        > perl-Digest-MD2-2.03-1.2.el5.rf
>> perl-Digest-SHA1-2.11-1.2.1             perl-Digest-SHA1-2.11-1.2.1
>> perl-Email-Date-Format-1.002-1.el5.rf | perl-File-Which-1.09-1.el5.rf
>> perl-Expect-1.21-1.el5.rf             | perl-IPC-Run3-0.043-1.el5.rf
>> perl-HTML-Parser-3.68-1.el5.rf        | perl-Math-GMP-2.05-1.el5.rf
>> perl-HTML-Tagset-3.20-1.el5.rf        | perl-Math-Pari-2.01080603-1.el5.rf
>> perl-HTTP-Server-Simple-0.43-1.el5.rf | perl-Net-SFTP-0.10-1.el5.rf
>> perl-IO-Compress-2.030-2.el5.rf       | perl-Net-SSH-Perl-1.34-1.el5.rf
>> perl-IO-Socket-SSL-1.01-2.el5         | perl-Probe-Perl-0.01-1.el5.rf
>> perl-IO-Tty-1.08-2.el5.rf             | perl-Sort-Versions-1.5-1.2.el5.rf
>> perl-LWP-UserAgent-Determined-1.04-1. | perl-String-CRC32-1.4-2.fc6
>> perl-MIME-Lite-3.029-1.el5.rf         | perl-Test-Script-1.05-1.el5.rf
>> perl-Net-DNS-0.59-3.el5               | perl-Tie-EncryptedHash-1.24-1.el5.rf
>> perl-Net-Daemon-0.43-1.el5.rf         <
>> perl-Net-IP-1.25-2.fc6                <
>> perl-Net-SSLeay-1.36-1.el5.rf         <
>> perl-Net-Telnet-3.03-5                <
>> perl-PlRPC-0.2020-1.el5.rf            <
>> perl-Sub-Uplevel-0.2002-1.el5.rf      <
>> perl-Test-Mock-LWP-0.05-1.el5.rf      <
>> perl-Test-MockObject-1.09-1.el5.rf    <
>> perl-Test-Warn-0.22-1.el5.rf          <
>> perl-Tree-DAG_Node-1.06-1.el5.rf      <
>> perl-UNIVERSAL-can-1.16-1.el5.rf      <
>> perl-UNIVERSAL-isa-1.03-1.el5.rf      <
>> perl-URI-1.35-3                         perl-URI-1.35-3
>> perl-WWW-Mechanize-1.72-1.el5.rf      <
>> perl-XML-LibXML-1.70-2.el5.rf         <
>> perl-XML-NamespaceSupport-1.11-1.el5. <
>> perl-XML-SAX-0.96-1.el5.rf            <
>> perl-libwww-perl-5.805-1.1.1          <
>> perl-suidperl-5.8.8-41.el5              perl-suidperl-5.8.8-41.el5
>>
>>
>>
>>
>>
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