[CentOS] mysqld breaks yum, help?

Dac Chartrand dac.chartrand at gmail.com
Mon Oct 6 01:44:10 UTC 2008 

> He installed some software that
> affects threading and it's likely other things (that he didn't  
> notice yet)
> are also affected. It's still weird, though. If you do not  
> overwrite any
> base files you won't hit this problem.

Woah.

Well, here's where I disagree What's non standard in my install other  
than PHP? Furthermore, uninstalling PHP does nothing?

I submit yum.log for further scrutiny. Note the part where I removed  
PHP and the problem still persisted.


Oct 03 20:13:12 Installed: nano.i386 1.3.12-1.1
Oct 03 20:28:42 Installed: make.i386 1:3.81-3.el5
Oct 03 20:29:58 Updated: libgcc.i386 4.1.2-42.el5
Oct 03 20:30:04 Updated: glibc-common.i386 2.5-24
Oct 03 20:30:10 Updated: glibc.i686 2.5-24
Oct 03 20:30:10 Installed: glibc-headers.i386 2.5-24
Oct 03 20:30:10 Installed: glibc-devel.i386 2.5-24
Oct 03 20:30:10 Installed: binutils.i386 2.17.50.0.6-6.el5
Oct 03 20:30:10 Installed: cpp.i386 4.1.2-42.el5
Oct 03 20:30:10 Installed: libgomp.i386 4.1.2-42.el5
Oct 03 20:30:11 Installed: gcc.i386 4.1.2-42.el5
Oct 03 20:39:36 Updated: bash.i386 3.2-21.el5
Oct 03 20:39:36 Updated: chkconfig.i386 1.3.30.1-2
Oct 03 20:39:36 Updated: popt.i386 1.10.2-48.el5
Oct 03 20:39:36 Updated: audit-libs.i386 1.6.5-9.el5
Oct 03 20:39:36 Updated: bzip2-libs.i386 1.0.3-4.el5_2
Oct 03 20:39:39 Updated: perl.i386 4:5.8.8-15.el5_2.1
Oct 03 20:39:39 Updated: libacl.i386 2.2.39-3.el5
Oct 03 20:39:40 Updated: libxml2.i386 2.6.26-2.1.2.6
Oct 03 20:39:40 Updated: freetype.i386 2.2.1-20.el5_2
Oct 03 20:39:40 Updated: libpng.i386 2:1.2.10-7.1.el5_0.1
Oct 03 20:39:40 Updated: libstdc++.i386 4.1.2-42.el5
Oct 03 20:39:40 Updated: libtiff.i386 3.8.2-7.el5_2.2
Oct 03 20:39:40 Updated: pcre.i386 6.6-2.el5_1.7
Oct 03 20:39:40 Updated: procps.i386 3.2.7-9.el5
Oct 03 20:39:40 Installed: nspr.i386 4.7.1-1.el5
Oct 03 20:40:11 Installed: nss.i386 3.12.1.1-1.el5.centos.1
Oct 03 20:40:11 Updated: file.i386 4.17-13
Oct 03 20:40:11 Updated: gnutls.i386 1.4.1-3.el5_1
Oct 03 20:40:11 Updated: cups-libs.i386 1:1.2.4-11.18.el5_2.1
Oct 03 20:40:11 Updated: tcp_wrappers.i386 7.6-40.4.el5
Oct 03 20:40:12 Updated: libX11.i386 1.0.3-9.el5
Oct 03 20:40:12 Updated: diffutils.i386 2.8.1-15.2.3.el5
Oct 03 20:40:12 Updated: iproute.i386 2.6.18-7.el5
Oct 03 20:40:12 Updated: pkgconfig.i386 1:0.21-2.el5
Oct 03 20:40:12 Updated: centos-release-notes.i386 5.2-2
Oct 03 20:40:12 Updated: centos-release.i386 10:5-2.el5.centos
Oct 03 20:40:12 Updated: cracklib-dicts.i386 2.8.9-3.3
Oct 03 20:40:12 Updated: libxslt.i386 1.1.17-2.el5_2.2
Oct 03 20:40:13 Updated: kernel-headers.i386 2.6.18-92.1.13.el5
Oct 03 20:40:13 Installed: keyutils-libs.i386 1.2-1.el5
Oct 03 20:40:13 Updated: bzip2.i386 1.0.3-4.el5_2
Oct 03 20:40:13 Updated: iptables.i386 1.3.5-4.el5
Oct 03 20:40:13 Updated: gzip.i386 1.3.5-10.el5.centos
Oct 03 20:40:13 Updated: telnet.i386 1:0.17-39.el5
Oct 03 20:40:14 Updated: man-pages.noarch 2.39-10.el5
Oct 03 20:40:14 Updated: tzdata.noarch 2008e-1.el5
Oct 03 20:40:14 Updated: traceroute.i386 3:2.0.1-3.el5
Oct 03 20:40:15 Updated: libselinux.i386 1.33.4-5.el5
Oct 03 20:40:15 Updated: coreutils.i386 5.97-14.el5
Oct 03 20:40:18 Updated: python.i386 2.4.3-21.el5
Oct 03 20:40:18 Updated: pam.i386 0.99.6.2-3.27.el5
Oct 03 20:40:18 Updated: shadow-utils.i386 2:4.0.17-13.el5
Oct 03 20:40:18 Updated: newt.i386 0.52.2-10.el5
Oct 03 20:40:18 Updated: device-mapper.i386 1.02.24-1.el5
Oct 03 20:40:18 Updated: e2fsprogs-libs.i386 1.39-15.el5
Oct 03 20:40:19 Updated: openssl.i686 0.9.8b-10.el5
Oct 03 20:40:19 Updated: krb5-libs.i386 1.6.1-25.el5
Oct 03 20:40:19 Updated: openldap.i386 2.3.27-8.el5_2.4
Oct 03 20:40:19 Updated: util-linux.i386 2.13-0.47.el5
Oct 03 20:40:19 Updated: psmisc.i386 22.2-6
Oct 03 20:40:19 Updated: libuser.i386 0.54.7-2.el5.5
Oct 03 20:40:20 Updated: samba-common.i386 3.0.28-1.el5_2.1
Oct 03 20:40:20 Updated: postgresql-libs.i386 8.1.11-1.el5_1.1
Oct 03 20:40:20 Updated: apr-util.i386 1.2.7-7.el5
Oct 03 20:40:20 Updated: bind-libs.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:22 Updated: fontconfig.i386 2.4.1-7.el5
Oct 03 20:40:22 Updated: cracklib.i386 2.8.9-3.3
Oct 03 20:40:22 Updated: usermode.i386 1.88-3.el5.1
Oct 03 20:40:22 Updated: e2fsprogs.i386 1.39-15.el5
Oct 03 20:40:22 Updated: audit-libs-python.i386 1.6.5-9.el5
Oct 03 20:40:22 Updated: libselinux-python.i386 1.33.4-5.el5
Oct 03 20:40:22 Updated: libxml2-python.i386 2.6.26-2.1.2.6
Oct 03 20:40:23 Updated: dbus.i386 1.0.0-7.el5
Oct 03 20:40:23 Updated: module-init-tools.i386 3.3-0.pre3.1.37.el5
Oct 03 20:40:23 Updated: net-tools.i386 1.60-78.el5
Oct 03 20:40:23 Updated: initscripts.i386 8.45.19.1.EL-1.el5.centos
Oct 03 20:40:23 Updated: openssh.i386 4.3p2-26.el5_2.1
Oct 03 20:40:23 Updated: sysklogd.i386 1.4.1-44.el5
Oct 03 20:40:23 Updated: mcstrans.i386 0.2.7-1.el5
Oct 03 20:40:23 Updated: logrotate.i386 3.7.4-8
Oct 03 20:40:26 Updated: samba.i386 3.0.28-1.el5_2.1
Oct 03 20:40:26 Updated: httpd.i386 2.2.3-11.el5_1.centos.3
Oct 03 20:40:26 Updated: gd.i386 2.0.33-9.4.el5_1.1
Oct 03 20:40:26 Installed: yum-metadata-parser.i386 1.1.2-2.el5
Oct 03 20:40:26 Installed: python-iniparse.noarch 0.2.3-4.el5
Oct 03 20:40:26 Updated: httpd-manual.i386 2.2.3-11.el5_1.centos.3
Oct 03 20:40:27 Updated: samba-swat.i386 3.0.28-1.el5_2.1
Oct 03 20:40:27 Updated: vixie-cron.i386 4:4.1-72.el5
Oct 03 20:40:27 Updated: openssh-server.i386 4.3p2-26.el5_2.1
Oct 03 20:40:27 Updated: openssh-clients.i386 4.3p2-26.el5_2.1
Oct 03 20:40:27 Updated: authconfig.i386 5.3.21-3.el5
Oct 03 20:40:28 Updated: samba-client.i386 3.0.28-1.el5_2.1
Oct 03 20:40:28 Updated: sudo.i386 1.6.8p12-12.el5
Oct 03 20:40:28 Updated: fetchmail.i386 6.3.6-1.1.el5
Oct 03 20:40:28 Updated: m2crypto.i386 0.16-6.el5.2
Oct 03 20:40:28 Updated: tcpdump.i386 14:3.9.4-12.el5
Oct 03 20:40:28 Updated: ntsysv.i386 1.3.30.1-2
Oct 03 20:40:28 Updated: tar.i386 2:1.15.1-23.0.1.el5
Oct 03 20:40:28 Updated: rpm.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: rpm-libs.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: rpm-python.i386 4.4.2-48.el5
Oct 03 20:40:29 Updated: policycoreutils.i386 1.33.12-14.el5
Oct 03 20:40:29 Updated: bind.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:29 Installed: yum-fastestmirror.noarch 1.1.10-9.el5.centos
Oct 03 20:40:29 Updated: caching-nameserver.i386 30:9.3.4-6.0.2.P1.el5_2
Oct 03 20:40:29 Updated: yum.noarch 3.2.8-9.el5.centos.2.1
Oct 03 20:51:41 Installed: logwatch - 7.3-6.el5.noarch
Oct 03 21:50:16 Installed: aspell - 12:0.60.3-7.1.i386
Oct 03 21:50:16 Installed: gmp - 4.1.4-10.el5.i386
Oct 03 21:50:16 Installed: php-common - 5.2.6-jason.1.i386
Oct 03 21:50:17 Installed: php-cli - 5.2.6-jason.1.i386
Oct 03 21:50:17 Installed: aspell-en - 50:6.0-2.1.i386
Oct 03 21:50:17 Installed: php - 5.2.6-jason.1.i386
Oct 03 21:56:43 Installed: php-mbstring - 5.2.6-jason.1.i386
Oct 03 21:57:59 Installed: php-bcmath - 5.2.6-jason.1.i386
Oct 03 21:59:03 Installed: php-pdo - 5.2.6-jason.1.i386
Oct 03 21:59:25 Installed: php-gd - 5.2.6-jason.1.i386
Oct 03 23:14:53 Installed: perl-DBI - 1.52-1.fc6.i386
Oct 03 23:14:54 Installed: mysql - 5.0.58-jason.2.i386
Oct 03 23:18:19 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 03 23:18:20 Installed: mysql-server - 5.0.58-jason.2.i386
Oct 03 23:26:00 Installed: keyutils-libs-devel - 1.2-1.el5.i386
Oct 03 23:26:00 Installed: libsepol-devel - 1.15.2-1.el5.i386
Oct 03 23:26:00 Installed: libselinux-devel - 1.33.4-5.el5.i386
Oct 03 23:26:01 Installed: e2fsprogs-devel - 1.39-15.el5.i386
Oct 03 23:26:01 Installed: krb5-devel - 1.6.1-25.el5.i386
Oct 03 23:26:01 Installed: zlib-devel - 1.2.3-3.i386
Oct 03 23:26:01 Installed: openssl-devel - 0.9.8b-10.el5.i386
Oct 03 23:26:01 Installed: mysql-devel - 5.0.58-jason.2.i386
Oct 03 23:37:50 Erased: perl-DBD-MySQL
Oct 03 23:37:50 Erased: mysql-server
Oct 03 23:37:50 Erased: mysql
Oct 03 23:37:50 Erased: mysql-devel
Oct 03 23:40:26 Installed: mysql - 5.0.45-7.el5.i386
Oct 03 23:40:26 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 03 23:40:27 Installed: mysql-devel - 5.0.45-7.el5.i386
Oct 03 23:40:27 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 03 23:42:25 Erased: mysql-devel
Oct 03 23:42:25 Erased: perl-DBD-MySQL
Oct 03 23:42:25 Erased: mysql-server
Oct 03 23:42:25 Erased: mysql
Oct 03 23:51:31 Installed: yum-priorities - 1.1.10-9.el5.centos.noarch
Oct 04 00:21:56 Installed: mysql - 5.0.45-7.el5.i386
Oct 04 00:21:57 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 04 00:21:57 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 04 01:57:17 Erased: mysql-server
Oct 04 01:58:13 Erased: perl-DBD-MySQL
Oct 04 01:58:13 Erased: mysql
Oct 04 01:58:50 Installed: mysql - 5.0.45-7.el5.i386
Oct 04 01:58:50 Installed: perl-DBD-MySQL - 3.0007-1.fc6.i386
Oct 04 01:58:50 Installed: mysql-server - 5.0.45-7.el5.i386
Oct 04 02:56:26 Installed: mx - 2.0.6-2.2.2.i386
Oct 04 02:56:26 Installed: MySQL-python - 1.2.1-1.i386
Oct 04 02:57:37 Erased: MySQL-python
Oct 04 02:57:37 Erased: mx
Oct 04 03:12:36 Installed: php-mysql - 5.2.6-jason.1.i386
Oct 04 03:14:37 Installed: php-pgsql - 5.2.6-jason.1.i386
Oct 05 00:05:50 Installed: mx - 2.0.6-2.2.2.i386
Oct 05 00:05:50 Installed: MySQL-python - 1.2.1-1.i386
Oct 05 00:49:04 Installed: nmap - 2:4.11-1.1.i386
Oct 05 01:08:37 Erased: php-pdo
Oct 05 01:08:37 Erased: php-mbstring
Oct 05 01:08:37 Erased: php-mysql
Oct 05 01:08:37 Erased: php-pgsql
Oct 05 01:08:37 Erased: php-bcmath
Oct 05 01:08:37 Erased: php-cli
Oct 05 01:08:37 Erased: php-common
Oct 05 01:08:37 Erased: php-gd
Oct 05 01:08:37 Erased: php
Oct 05 01:12:56 Installed: php-common - 5.2.6-2.el5s2.i386
Oct 05 01:12:56 Installed: php-pdo - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Updated: postgresql-libs - 8.2.9-1.el5s2.i386
Oct 05 01:12:58 Installed: php-cli - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: postgresqlclient81 - 8.1.11-1.el5s2.i386
Oct 05 01:12:58 Installed: php-mysql - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-gd - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-mbstring - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-bcmath - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php-pgsql - 5.2.6-2.el5s2.i386
Oct 05 01:12:58 Installed: php - 5.2.6-2.el5s2.i386

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